BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028B02LP1|AL428841
(884 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1738 1664 0.0
>3x_Contig1738
Length = 21411
Score = 1664 bits (826), Expect = 0.0
Identities = 857/882 (97%)
Strand = Plus / Plus
Query: 1 agctcccagcttcatctgctttcccatcgtctcatctctctttccaatcacaccacatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18963 agctcccagcttcatctgctttcccatcgtctcatctctctttccaatcacaccacatat 19022
Query: 61 aaacttcgtctcgagcttcgattctttgctttttttgtgcagcaccttctatggaaamag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 19023 aaacttcgtctcgagcttcgattctttgctttttttgtgcagcaccttctatggaaaaag 19082
Query: 121 aaagagcaaggctggtgaaamagaaatattcagcatgggaaatctggcgatgtcatctga 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 19083 aaagagcaaggctggtgaaaaagaaatattcagcatgggaaatctggcgatgtcatctga 19142
Query: 181 cactcgtcgcagcccaacagaaaacgggtattctagcaagtgtctatggagctaccacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19143 cactcgtcgcagcccaacagaaaacgggtattctagcaagtgtctatggagctaccacca 19202
Query: 241 tgcmatacgaagaatcgccgaatcgtgtttattttgtactgacggtgctttgcatgggta 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19203 tgcaatacgaagaatcgccgaatcgtgtttattttgtactgacggtgctttgcatgggta 19262
Query: 301 cattttggtatgtatggtctctgggacggaaaaactaamagtggaacccggaccagatag 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 19263 cattttggtatgtatggtctctgggacggaaaaactaaaagtggaacccggaccagatag 19322
Query: 361 tatcggmaggatgattgtsatgataatacgttgtgtggttcagttgggtaggtatggctg 420
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 19323 tatcggaaggatgattgtgatgataatacgttgtgtggttcagttgggtaggtatggctg 19382
Query: 421 ttgcmttatatatmgacaatatgtctcgtccttttttttgtttttgttttctttggcatt 480
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19383 ttgcattatatatagacaatatgtctcgtccttttttttgtttttgttttctttggcatt 19442
Query: 481 gactggttgtactactcttatttgacgagtctcaaggtttagtattctacgatcmasatt 540
||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||
Sbjct: 19443 gactggttgtactactcttatttgaagagtctcaaggtttagtattctacgatcaagatt 19502
Query: 541 aamgtaganaanccctcggattcgtgtttmmtaaatgttaaacaamtgtaaaattaacaa 600
|| ||||| || ||||||||||||||||| |||||||||||||| ||| ||||||||||
Sbjct: 19503 aaagtagagaaaccctcggattcgtgtttcctaaatgttaaacaactgtcaaattaacaa 19562
Query: 601 ttttcaaattactagacagattgggagcggtgcctatggtgtcgttttccatgctatcga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19563 ttttcaaattactagacagattgggagcggtgcctatggtgtcgttttccatgctatcga 19622
Query: 661 cctaataacagagaacgaatatgctattaaagctattatgaaatccaatgatgacccatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19623 cctaataacagagaacgaatatgctattaaagctattatgaaatccaatgatgacccatt 19682
Query: 721 ggttcctcactctgrgamgtmtttgaagaaaagtgmtgtmttgmaaacacaactttacca 780
|||||||||||||| || || |||||||||||||| ||| ||| ||||||||||||||||
Sbjct: 19683 ggttcctcactctgagacgtctttgaagaaaagtgctgtcttgcaaacacaactttacca 19742
Query: 781 ttatttcaagtcgttccagaataaactgtttttaccaacgatcgatttggattcggkgtt 840
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 19743 ttatttcaagtcgttccagaataaactgtttttaccaacgatcgatttggattcggtgtt 19802
Query: 841 ggcattgtctgacgatcaactgagacaagcccctcattatag 882
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19803 ggcattgtctgacgatcaactgagacaagcccctcattatag 19844
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5495
Number of Sequences: 1807
Number of extensions: 5495
Number of successful extensions: 200
Number of sequences better than 1.0e-20: 1
length of query: 884
length of database: 10,358,551
effective HSP length: 16
effective length of query: 868
effective length of database: 10,329,639
effective search space: 8966126652
effective search space used: 8966126652
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)